epiGeEC Public Datasets
Release
hg19_IHEC_2016-11
hg19_IHEC_2017-10
hg38_IHEC_2016-11
hg38_IHEC_2017-10
mm10_IHEC_2016-11
mm10_IHEC_2017-10
sacCer3_GEO_2016-07
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Assay
Assay Category
Cell Type
Cell Type Category
Publishing Group
File Name
Institution
ATAC-Seq
ATF3
BATF
BCL11A
BCL3
BCLAF1
BDP1
BHLHE40
BRCA1
BRF1
BRF2
CCNT2
CEBPB
CHD2
CTBP2
CTCF
CTCFL
Chipmentation H3K27ac
Chipmentation H3K27me3
Chipmentation H3K36me3
Chipmentation H3K4me1
Chipmentation H3K4me3
Chipmentation H3K9me3
Chromatin_Acc
DNase-Seq
E2F1
E2F4
E2F6
EBF1
EGR1
ELF1
ELK4
EP300
ESR1
ESRRA
ETS1
FAIRE-Seq
FOS
FOSL1
FOSL2
FOXA1
FOXA2
Footprinting
GABPA
GATA1
GATA2
GATA3
GTF2B
GTF2F1
GTF3C2
H2AK5ac
H2AK9ac
H2AZ
H2A_Zac
H2BK120ac
H2BK12ac
H2BK15ac
H2BK20ac
H2BK5ac
H3K14ac
H3K18ac
H3K23ac
H3K23me2
H3K27ac
H3K27me3
H3K36me3
H3K4ac
H3K4me1
H3K4me2
H3K4me3
H3K56ac
H3K79me1
H3K79me2
H3K9_14ac
H3K9ac
H3K9me1
H3K9me3
H3T11ph
H4K12ac
H4K20me1
H4K5ac
H4K8ac
H4K91ac
HDAC2
HDAC8
HMGN3
HNF4A
HNF4G
HSF1
IRF1
IRF3
IRF4
Input
JUN
JUNB
JUND
MAFF
MAFK
MAX
MEF2A
MEF2C
MRE-Seq
MXI1
MYC
MeDIP-Seq
NANOG
NFE2
NFKB1
NFYA
NFYB
NOMe-Seq
NR2C2
NR3C1
NRF1
PAX5
PBX3
POLR2A
POLR3A
POLR3G
POU2F2
POU5F1
PPARGC1A
PRDM1
RAD21
RDBP
REST
RFX5
RNA-Seq
RRBS
RXRA
SETDB1
SIN3A
SIRT6
SIX5
SMARCA4
SMARCB1
SMARCC1
SMARCC2
SMC3
SP1
SP2
SPI1
SREBF1
SRF
STAT1
STAT2
STAT3
SUZ12
TAF1
TAF7
TAL1
TBP
TCF12
TCF7L2
TFAP2A
TFAP2C
THAP1
TRIM28
USF1
USF2
WGB-Seq
WRNIP1
YY1
ZBTB33
ZBTB7A
ZEB1
ZNF143
ZNF263
ZNF274
ZZZ3
mRNA-Seq
smRNA-Seq
Histone Modifications
Methylome
Other
Regulome
Transcription Factor Binding Sites
Transcriptome
184-hTert-L2
184-hTert-L9
A172
A375
A549
AG04449
AG04450
AG09309
AG09319
AG10803
Adipocyte
Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells
Adipose_Nuclei
Adipose_Tissue
Adrenal_Gland
Adult_Kidney
Adult_Liver
AoAF
AoSMC
Aorta
Astrocytes
B cell
B cells
BE2C
BJ
Basal cells
Beta_cell
Bladder
Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells
Brain
Brain-Frontal Lobe-Left
Brain-Frontal Lobe-Right
Brain-Occipetal Lobe-Right
Brain-Temporal lobe-Left
Brain-right temporal
Brain_Angular_Gyrus
Brain_Anterior_Caudate
Brain_Cerebellum
Brain_Cingulate_Gyrus
Brain_Germinal_Matrix
Brain_Hippocampus_Middle
Brain_Inferior_Temporal_Lobe
Brain_Mid_Frontal_Lobe
Brain_Substantia_Nigra
Breast_Fibroblast_Primary_Cells
Breast_Luminal_Epithelial_Cells
Breast_Myoepithelial_Cells
Breast_Stem_Cells
Breast_vHMEC
Brodmann (1909) area 11
Brodmann (1909) area 44
Brodmann (1909) area 8;Brodmann (1909) area 9
CD14-positive monocyte
CD14-positive, CD16-negative classical monocyte
CD14_Primary_Cells
CD15_Primary_Cells
CD19+ cells (B lymphocytes)
CD19_Primary_Cells
CD20_Primary_Cells
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
CD34_Cultured_Cells
CD34_Primary_Cells
CD38-negative naive B cell
CD3_Primary_Cells
CD4+_CD25+_CD127-_Treg_Primary_Cells
CD4+_CD25-_CD45RA+_Naive_Primary_Cells
CD4+_CD25-_CD45RO+_Memory_Primary_Cells
CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells
CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells
CD4+_CD25-_Th_Primary_Cells
CD4+_CD25int_CD127+_Tmem_Primary_Cells
CD4-positive alpha-beta memory T cell
CD4-positive helper T cell
CD4-positive, alpha-beta T cell
CD4-positive, alpha-beta memory T cell
CD4_Memory_Primary_Cells
CD4_Naive_Primary_Cells
CD4_Primary_Cells
CD56_Primary_Cells
CD8-positive, alpha-beta T cell
CD8_Memory_Primary_Cells
CD8_Naive_Primary_Cells
CD8_Primary_Cells
CLL
CMK
Caco-2
Caco2
Caki2
Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells
Chorion
Chronic lymphocytic leukemia
Colon_Smooth_Muscle
Colonic_Mucosa
DND-41
DOHH2
Daoy
Duodenum_Mucosa
Duodenum_Smooth_Muscle
ECC1
ES-I3
ES-WA7
Esophagus
Fetal_Adrenal_Gland
Fetal_Brain
Fetal_Heart
Fetal_Intestine_Large
Fetal_Intestine_Small
Fetal_Kidney
Fetal_Kidney_Left
Fetal_Kidney_Right
Fetal_Lung
Fetal_Lung_Left
Fetal_Lung_Right
Fetal_Muscle_Arm
Fetal_Muscle_Back
Fetal_Muscle_Leg
Fetal_Muscle_Lower_Limb_Skeletal
Fetal_Muscle_Trunk
Fetal_Muscle_Upper_Limb_Skeletal
Fetal_Muscle_Upper_Trunk
Fetal_Ovary
Fetal_Placenta
Fetal_Renal_Cortex
Fetal_Renal_Cortex_Left
Fetal_Renal_Cortex_Right
Fetal_Renal_Pelvis
Fetal_Renal_Pelvis_Left
Fetal_Renal_Pelvis_Right
Fetal_Skin
Fetal_Spinal_Cord
Fetal_Spleen
Fetal_Stomach
Fetal_Testes
Fetal_Thymus
FibroP
Fibrobl
Fibroblasts_Fetal_Skin_Abdomen
Fibroblasts_Fetal_Skin_Back
Fibroblasts_Fetal_Skin_Biceps_Left
Fibroblasts_Fetal_Skin_Biceps_Right
Fibroblasts_Fetal_Skin_Quadriceps_Left
Fibroblasts_Fetal_Skin_Quadriceps_Right
Fibroblasts_Fetal_Skin_Scalp
Fibroblasts_Fetal_Skin_Upper_Back
G401
GM06990
GM10847
GM12864
GM12865
GM12866
GM12872
GM12873
GM12874
GM12875
GM12878
GM12891
GM12892
GM15510
GM18505
GM18507
GM18526
GM18951
GM19099
GM19193
GM19238
GM19239
GM19240
Gastric
Germinal Center B-Cell-Like Diffuse Large B-Cell Lymphoma
Gliobla
H1
H1-hESC
H1_BMP4_Derived_Mesendoderm_Cultured_Cells
H1_BMP4_Derived_Trophoblast_Cultured_Cells
H1_Derived_Embryoid_Body_Cultured_Cells
H1_Derived_Mesenchymal_Stem_Cells
H1_Derived_Neuronal_Progenitor_Cultured_Cells
H1hESC
H4
H7-hESC
H7hESC
H9
H9ES
H9_Derived_Embryoid_Body_Cultured_Cells
H9_Derived_Neuron_Cultured_Cells
H9_Derived_Neuronal_Progenitor_Cultured_Cells
HAEpiC
HAc
HAh
HAsp
HBMEC
HCF
HCFaa
HCM
HCPEpiC
HCT116
HConF
HEEpiC
HEK293
HFF
HFF-Myc
HFFMyc
HGF
HIPEpiC
HL-60
HL60
HMEC
HMF
HMVECLBl
HMVECLLy
HMVECdBlAd
HMVECdBlNeo
HMVECdLyAd
HMVECdLyNeo
HMVECdNeo
HNPCEpiC
HPAF
HPDE6E6E7
HPF
HPdLF
HRCEpiC
HRE
HRGEC
HRPEpiC
HSMM
HSMMtube
HT-29
HT1080
HTB11
HTR8svn
HUES1
HUES13
HUES1_Derived_Embryoid_Body_Cultured_Cells
HUES28
HUES3
HUES3_Derived_Embryoid_Body_Cultured_Cells
HUES44
HUES45
HUES45_Derived_Embryoid_Body_Cultured_Cells
HUES48
HUES49
HUES53
HUES6
HUES62
HUES63
HUES64
HUES65
HUES66
HUES6_Derived_Embryoid_Body_Cultured_Cells
HUES8
HUES9
HUVEC
HVMF
HeLa-S3
HeLaS3
Heart
Hematopoietic
HepG2
HepaRG
Hepatocytes
Huh7
IMR-90
IMR90
Ishikawa
Islet_cell
Jurkat
K562
Karpas-422
Kidney
LHCN-M2
LNCaP
LNCaP clone FGC
Large Intestine-Colon
Large Intestine-Colon-Ascending (Right)
Large Intestine-Colon-Rectosigmoid
Left_Ventricle
Loucy
Luminal cells-mature
Luminal progenitor
Lung
M059J
MCF-7
MCF10A
MCF10AErSrc
MCF7
MG63
Mantle cell lymphoma
Medullo
Melano
Mesangial
Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells
Mobilized_CD34_Primary_Cells
Mobilized_CD3_Primary_Cells
Mobilized_CD4_Primary_Cells
Mobilized_CD56_Primary_Cells
Mobilized_CD8_Primary_Cells
MonocytesCD14RO01746
Multiple myeloma
Muscle_Satellite_Cultured_Cells
Myeloid cell
Myometr
NB4
NCI-H460
NHA
NHBE
NHDFAd
NHDFneo
NHEK
NHLF
NT2/D1
NT2D1
Neurosphere_Cultured_Cells_Cortex_Derived
Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived
OCI-LY7
Osteobl
Ovary
PANC1
PBDE
PC-3
PFSK-1
PFSK1
PanIsletD
PanIslets
Pancreas
Pancreatic_Islets
Penis_Foreskin_Fibroblast_Primary_Cells
Penis_Foreskin_Keratinocyte_Primary_Cells
Penis_Foreskin_Melanocyte_Primary_Cells
Peripheral_Blood_Mononuclear_Primary_Cells
Placenta_Amnion
Placenta_Basal_Plate
Placenta_Chorion_Smooth
Placenta_Trophoblast_Primary_Cells
Placenta_Villi
Plasma cell
Podocyte
Preadipocyte
Prefrontal Cortex
Primary_Fibroblast
ProgFib
Psoas_Muscle
Purkinje cell
RPMI-7951
RPTEC
Raji
Rectal_Mucosa
Rectal_Smooth_Muscle
Right_Atrium
Right_Ventricle
SAEC
SHSY5Y
SJCRH30
SJSA1
SK-MEL-5
SK-N-DZ
SK-N-MC
SK-N-SH
SKNMC
SKNSHRA
Sigmoid_Colon
SkMC
Skeletal_Muscle
Small_Intestine
Spleen
Sporadic Burkitt lymphoma
Stellate
Stomach_Mucosa
Stomach_Smooth_Muscle
Stromal cells
T cell
T47D
T8988T
TRExHEK293
Temporal Cortex
Testis_Spermatozoa_Primary_Cells
Th1
Th17_Primary_Cells
Th2
Thymus
Thyroid
Treg_Primary_Cells
U2OS
U87
UCSF-4*
Urothelia
WERI-Rb-1
WERIRb1
WI38
adipocyte of omentum tissue
airway epithelial cell
alpha_cell
alternatively activated macrophage
amygdala
anterior cingulate cortex
aortic smooth muscle cell
articular chondrocyte of knee joint
astrocyte
astrocyte of the cerebellum
astrocyte of the spinal cord
bipolar spindle neuron
bladder microvascular endothelial cell
brain microvascular endothelial cell
bronchial epithelial cell
bronchial smooth muscle cell
bronchus fibroblast of lung
camera-type eye
cardiac atrium fibroblast
cardiac fibroblast
cardiac mesoderm
cardiac muscle cell
cardiac myocyte
cardiac ventricle fibroblast
central memory CD4-positive, alpha-beta T cell
central memory CD8-positive, alpha-beta T cell
cerebellar granule cell
cerebellum
choroid plexus epithelial cell
class switched memory B cell
common lymphoid progenitor
common myeloid progenitor
conventional dendritic cell
cytotoxic CD56-dim natural killer cell
dermis blood vessel endothelial cell
dermis lymphatic vessel endothelial cell
dermis microvascular lymphatic vessel endothelial cell
diencephalon
early neuron
effector memory CD4-positive, alpha-beta T cell
effector memory CD8-positive, alpha-beta T cell
effector memory CD8-positive, alpha-beta T cell, terminally differentiated
endometrial microvascular endothelial cells
endothelial cell of coronary artery
endothelial cell of umbilical vein
endothelial cell of umbilical vein (proliferating)
endothelial cell of umbilical vein (resting)
eosinophil
epithelial cell of alveolus of lung
epithelial cell of esophagus
epithelial cell of proximal tubule
epithelial cell of umbilical artery
erythroblast
fibroblast of arm
fibroblast of dermis
fibroblast of gingiva
fibroblast of lung
fibroblast of mammary gland
fibroblast of pedal digit skin
fibroblast of pulmonary artery
fibroblast of skin of abdomen
fibroblast of the aortic adventitia
fibroblast of upper leg skin
fibroblast of villous mesenchyme
foreskin fibroblast
frontal cortex
germinal center B cell
glomerular endothelial cell
granulocyte monocyte progenitor cell
hESC_Derived_CD184+_Endoderm_Cultured_Cells
hESC_Derived_CD56+_Ectoderm_Cultured_Cells
hESC_Derived_CD56+_Mesoderm_Cultured_Cells
hair follicle dermal papilla cell
hair follicular keratinocyte
hematopoietic multipotent progenitor cell
hematopoietic stem cell
hepatocyte
iPS
iPS-11a
iPS-11b
iPS-11c
iPS-15b
iPS-17a
iPS-17b
iPS-18a
iPS-18b
iPS-18c
iPS-20b
iPS-27b
iPS-27e
iPSC
iPS_DF_19.11
iPS_DF_19.7
iPS_DF_4.7
iPS_DF_6.9
induced pluripotent stem cell
inflammatory macrophage
keratinocyte
kidney epithelial cell
liver
lung microvascular endothelial cell
macrophage
mammary epithelial cell
mammary microvascular endothelial cell
mature eosinophil
mature neutrophil
megakaryocyte-erythroid progenitor cell
melanocyte of skin
memory B cell
mesangial cell
mesenchymal stem cell of Wharton's jelly
mesenchymal stem cell of adipose
mesenchymal stem cell of the bone marrow
metanephros
monocyte
mononuclear cell
myometrial cell
myotube
naive CD4-positive T cell
nasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa
neural cell
neural progenitor cell
neutrophil
occipital lobe
omentum preadipocyte
osteoblast
pHTE
parietal lobe
pericardium fibroblast
pericyte cell
placental epithelial cell
precursor lymphocyte of B lineage
pulmonary artery endothelial cell
pyramidal cell
regular cardiac myocyte
regulatory T cell
renal cortical epithelial cell
retinal pigment epithelial cell
skeletal muscle cell
skeletal muscle myoblast
skeletal muscle satellite cell
skeletal muscle tissue
skin of body
smooth muscle cell
smooth muscle cell of bladder
smooth muscle cell of the coronary artery
smooth muscle cell of the pulmonary artery
smooth muscle cell of the umbilical artery
smooth muscle cell of trachea
spinal cord
stomach
subcutaneous fat cell
subcutaneous preadipocyte
temporal lobe
thoracic aorta endothelial cell
thyroid gland
tongue
tracheal epithelial cell
umbilical cord
urinary bladder
uterine smooth muscle cell
uterus
vein endothelial cell
visceral abdominal adipose tissue
Adrenal
Blood
Bone
Bone Marrow
Brain
Breast
Cell Line
ES Cells
ES-derived cells
Endothelia
Epithelial
Eye
Fat
Gastrointestinal
Genitourinary
Heart
Hematopoietic Stem
Kidney
Liver
Lung
Muscle
Other
Placenta
Primary Cell
Skin
Spleen
Stromal
Thymus
Thyroid
Tonsil
iPS Cells
AMED-CREST
Blueprint
CEEHRC
DEEP
ENCODE
GIS
KNIH
NIH Roadmap
Assay
Assay Category
Cell Type
Cell Type Category
Publishing Group
File Name
Institution